Trac June 2021

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46 discussions

#2538: Inclusion of kuibit
by Gabriele Bozzola 04 Jun '21

04 Jun '21

#2538: Inclusion of kuibit Reporter: Gabriele Bozzola Status: new Milestone: Version: development version Type: enhancement Priority: major Component: kuibit is a Python package for post-processing simulations. The tool comes with several features for analysis and visualization. For some of the most common operations $e.g., 2D plot of a grid variable, extraction of gravitational waves, ...$, users can directly obtain the result without writing any code. The number of such ready-made scripts grows with every release of kuibit. For everything else, kuibit has a large number of features $[https://sbozzolo.github.io/kuibit/features.html$](https://sbozzolo.github.io/kuibit/features.html)) that can be used in scripts or notebooks. kuibit is designed to be user-friendly: it has rich documentation $[https://sbozzolo.github.io/kuibit/$,](https://sbozzolo.github.io/kuibit/),) examples ready to be used, and tutorials. kuibit is also designed to be developer- and maintainer- friendly: it is thoroughly commented, and it implements several continuous integration pipelines to test, document, and publish the package automatically. The high quality of kuibit is also recognized by its publication in the Journal of Open Source Software $[https://joss.theoj.org/papers/10.21105/joss.03099$.](https://joss.theoj.org/papers/10.21105/joss.03099).) kuibit is largely inspired by Wolfgang Kastaun's PyCactus. kuibit shares the same overall design with PyCactus, and in some cases, the implementation details too. kuibit would not exist without PyCactus. As far as I know, 5-10 people are actively using kuibit as their main tool to interface with the output of simulations. The feedback I got is overwhelmingly positive: users that are new to the Einstein Toolkit praise the simplicity of use and the comfort of working in Python; experienced users claim that kuibit allows them to focus on the science instead of the technical details. kuibit has already been used for publications, see [https://inspirehep.net/literature?sort=mostrecent&size=25&page=1&q=refersto… kuibit repo: [https://github.com/Sbozzolo/kuibit](https://github.com/Sbozzolo/kuibit) Comments and feedback are welcomed. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2538/inclusion-of-kuib…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: resolved Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Changes (by Roland Haas): status: resolved (was open) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: open Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Comment (by Roland Haas): Thank you. Applied as git hash [15f1764](https://bitbucket.org/simfactory/simfactory2/commits/15f1764cf40b5… "simdt: avoid producing float types when computing cores" of [simfactory2](https://bitbucket.org/simfactory/simfactory2) on ET\_2021\_05 Applied as git hash [577204f](https://bitbucket.org/simfactory/simfactory2/commits/577204f93a2a9… "simdt: avoid producing float types when computing cores" of [simfactory2](https://bitbucket.org/simfactory/simfactory2) on master -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Steven R. Brandt 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: open Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Comment (by Steven R. Brandt): Please apply. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: open Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Changes (by Roland Haas): assignee: Roland Haas (was ) responsible: [] (was ) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: open Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Changes (by Roland Haas): status: open (was new) -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: new Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Comment (by Roland Haas): Please review -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: new Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Comment (by Roland Haas): Pull request is [https://bitbucket.org/simfactory/simfactory2/pull-requests/58/simdt-avoid-p… -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2537: sim setup-silent produces float values for ppn in machine.ini file
by Roland Haas 04 Jun '21

04 Jun '21

#2537: sim setup-silent produces float values for ppn in machine.ini file Reporter: Roland Haas Status: new Milestone: Version: development version Type: bug Priority: critical Component: SimFactory Running `sim setup-silent` on a freshly updates macOS BigSur x86 VM I get: ``` % ./simfactory/bin/sim whoami Error: value for key ppn in section osx-homebrew is not of required type int Aborting Simfactory. ``` On that system python3 happens to be Python 3.8.2. This can be fixed by: ```diff diff --git a/lib/simdt.py b/lib/simdt.py index 6b51053f..c1a63cea 100644 --- a/lib/simdt.py +++ b/lib/simdt.py @@ -528,7 +528,7 @@ class DecisionTree: # Throughout, we ignore hyperthreading. That can be added later. if platform.system()== 'Darwin': SocketsPerNode = int(cpu_info['hw.packages']) - CoresPerSocket = int(cpu_info['hw.physicalcpu']) / SocketsPerNode + CoresPerSocket = int(cpu_info['hw.physicalcpu']) // SocketsPerNode else: CoresPerSocket = int(cpu_info['Core(s) per socket']) SocketsPerNode = int(cpu_info['Socket(s)']) ``` which should be backported. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2537/sim-setup-silent-…

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#2536: Certificate for https://cactuscode.org is not trusted
by Roland Haas 03 Jun '21

03 Jun '21

#2536: Certificate for https://cactuscode.org is not trusted Reporter: Erik Schnetter Status: open Milestone: Version: development version Type: bug Priority: major Component: Cactus website Comment (by Roland Haas): Right now with https the certificates do not match eg one gets: ``` $ curl -I --resolve cactuscode.org:443:185.199.108.153 https://cactuscode.org/ curl: (60) SSL: no alternative certificate subject name matches target host name 'cactuscode.org' ``` while with www $for which a CNAME entry exists$ it works fine: ``` curl -I --resolve www.cactuscode.org:443:185.199.108.153 https://www.cactuscode.org/ HTTP/2 200 server: GitHub.com content-type: text/html; charset=utf-8 last-modified: Thu, 03 Jun 2021 17:52:12 GMT access-control-allow-origin: * etag: "60b916cc-162d" expires: Thu, 03 Jun 2021 18:07:53 GMT cache-control: max-age=600 x-proxy-cache: MISS x-github-request-id: B928:072C:1DF684:3BFC8C:60B91821 accept-ranges: bytes date: Thu, 03 Jun 2021 17:58:04 GMT via: 1.1 varnish age: 11 x-served-by: cache-pwk4948-PWK x-cache: HIT x-cache-hits: 1 x-timer: S1622743085.638120,VS0,VE1 vary: Accept-Encoding x-fastly-request-id: 2995efdb1d35c95f3fd3b967d71a0fb3d980e170 content-length: 5677 ``` ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2536/certificate-for-h…

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Trac June 2021