Trac December 2024

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#2837: Building the Einstein Toolkit
by Suo-Ning Wang 18 Dec '24

18 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: development version Type: bug Priority: major Component: EinsteinToolkit website Comment (by Suo-Ning Wang): Hello Roland Haas, I'm sorry to bother you again. I have download the cmake and my system is based on Opensuse not Ubuntu. Then I build the toolkit and also made some mistake. I attached the make.log on the website and hope you help me. Thank you again. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Roland Haas 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: development version Type: bug Priority: major Component: EinsteinToolkit website Comment (by Roland Haas): Hello Suo-Ning Wang, hmm, actually looking at the paths in your error message, this is not a personal Ubuntu based laptop, is it? Instead this looks like some share university system where you yourself cannot install cmake. If the system offers “environment modules” $`module list` / `module load`$ then you can try and see if there is a `cmake` module available $or, if the system is small enough, the sysadmin may be willing to install a copy of cmake$. If that is not possible then you have to compile your own `cmake`. The easiest way is actually using the EinsteinToolkit where there is a “branch” that provides cmake. To do so please run $in the same directory where you first ran \`GetComponents\`$: ``` ./GetComponents --no-update https://bitbucket.org/einsteintoolkit/manifest/raw/a3d645186fc84f605ede2103… ``` and after that remove your partially compiled code ``` rm -rf Cactus/configs/sim ``` then compile again using `sim build` as shown in the tutorial. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Roland Haas 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: development version Type: bug Priority: major Component: EinsteinToolkit website Changes (by Roland Haas): responsible: [] (was ) component: EinsteinToolkit website (was ) version: development version (was ) assignee: Roland Haas (was ) When I am building the Einstein Toolkit, I find some bug which I cannot solve. `./simfactory/bin/sim build -j2 --thornlist thornlists/einsteintoolkit.th` I want to know what went wrong. ![](https://bitbucket.org/repo/8zBLME5/images/709390997-c10063cf-bf10-4b91-beae-14602e5f2850.png) ‌ ![](https://bitbucket.org/repo/8zBLME5/images/3831281540-21b902a3-abf7-44a8-9249-52618111b4d1.png) ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Roland Haas 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Roland Haas): Hello Suo-Ning Wang, Bitbucket unfortunately hides the file attach button behind the “More” button. ![](https://bitbucket.org/repo/8zBLME5/images/3758663982-2024-12-17T093310.jpg) Looking at your log file $you can use triple backticks \` to create a “code” block and avoid pasted text be formatted$ there is the line: ``` cmake -DADIOS2_USE_MPI=ON -DADIOS2_USE_HDF5=OFF -DCMAKE_INSTALL_PREFIX=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/scratch/external/ADIOS2 -DCMAKE_INSTALL_LIBDIR=lib -DBUILD_TESTING=OFF -DADIOS2_BUILD_EXAMPLES=OFF -DADIOS2_USE_Campaign=OFF -DADIOS2_USE_Fortran=no -DADIOS2_USE_Python=OFF -DADIOS2_USE_ZeroMQ=OFF -DADIOS2_USE_PNG=OFF -DADIOS2_USE_BZip2=OFF -DADIOS2_USE_SST=yes -DADIOS2_USE_BP5=yes -DADIOS2_USE_CUDA= -DBUILD_SHARED_LIBS=OFF -DCMAKE_BUILD_TYPE=Release .. /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/ADIOS2/src/build.sh: 行 72: cmake: 未找到命令 ``` and Google translate translates the last bit $in Chinese$ as: ``` cmake: command not found ``` so you are missing the `cmake` command. The simplest way to provide it under Ubuntu is ``` sudo apt install cmake ``` ‌ This is currently missing from the “Prerequisites” section of [https://github.com/einsteintoolkit/jupyter-et/blob/master/tutorial-server/n… , sorry. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Suo-Ning Wang 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Suo-Ning Wang): ``` # generic # This option list is used internally by simfactory as a template during the # sim setup and sim setup-silent commands # Edit at your own risk # Whenever this version string changes, the application is configured # and rebuilt from scratch VERSION = 2018-12-13 CPP = cpp CC = gcc CXX = g++ CUCC = nvcc FPP = cpp F90 = gfortran # for CarpetX GPU support # subset CUCCFLAGS without "-x cu" (must no be used here) and options used only to compile code # -fno-lto can avoid errors connected to fat binaries # LD = nvcc --compiler-bindir g++ -g -fno-lto --forward-unknown-to-host-compiler --relocatable-device-code=true --objdir-as-tempdir CPPFLAGS = FPPFLAGS = -traditional # enable for CarpetX GPU suport # CPPFLAGS = -DSIMD_CPU # use gnu99 and not c99 since FFTW3 relies on gcc's "asm" function CFLAGS = -g -std=gnu99 # if compiler is old and you do not need AMReX, can change to c++11 # leave as c++17 for easier CUDA support CXXFLAGS = -g -std=c++17 -D_GNU_SOURCE CUCCFLAGS = --compiler-bindir g++ -x cu -g -std=c++17 -D_GNU_SOURCE --expt-relaxed-constexpr --extended-lambda --forward-unknown-to-host-compiler --Werror cross-execution-space-call --Werror ext-lambda-captures-this --relocatable-device-code=true --objdir-as-tempdir F90FLAGS = -g -fcray-pointer -ffixed-line-length-none LDFLAGS = -rdynamic # for CUDA support # LIBS = gfortran nvToolsExt curand DEBUG = no CPP_DEBUG_FLAGS = C_DEBUG_FLAGS = CXX_DEBUG_FLAGS = CUCC_DEBUG_FLAGS= OPTIMISE = yes CPP_OPTIMISE_FLAGS = C_OPTIMISE_FLAGS = -O2 CXX_OPTIMISE_FLAGS = -O2 CUCC_OPTIMISE_FLAGS= -O2 F90_OPTIMISE_FLAGS = -O2 PROFILE = no CPP_PROFILE_FLAGS = C_PROFILE_FLAGS = -pg CXX_PROFILE_FLAGS = -pg CUCC_PROFILE_FLAGS= -pg F90_PROFILE_FLAGS = -pg WARN = yes CPP_WARN_FLAGS = -Wall C_WARN_FLAGS = -Wall CXX_WARN_FLAGS = -Wall CUCC_WARN_FLAGS= -Wall F90_WARN_FLAGS = -Wall OPENMP = yes CPP_OPENMP_FLAGS = -fopenmp FPP_OPENMP_FLAGS = -D_OPENMP C_OPENMP_FLAGS = -fopenmp CXX_OPENMP_FLAGS = -fopenmp CUCC_OPENMP_FLAGS= -fopenmp F90_OPENMP_FLAGS = -fopenmp # for CUDA support DISABLE_INT16=yes DISABLE_REAL16=yes VECTORISE = yes VECTORISE_ALIGNED_ARRAYS = no VECTORISE_INLINE = yes AMREX_ENABLE_CUDA = no PTHREADS_DIR = NO_BUILD ``` ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Suo-Ning Wang 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Suo-Ning Wang): /configs/sim/OptionList is below. I don’t find where I can upload the file, I can only paste on this website. I feel so sorry about this. -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Suo-Ning Wang 17 Dec '24

17 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Suo-Ning Wang): Using configuration: sim Building sim if test ! -f "/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk\_Config.h" ; then \\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ echo "Cactus - version: 4.17.0";\\ if test "x"yes"" = 'xno'; then\\ if $! perl -s lib/make/setup\_configuration.pl sim$ ; then \\ echo "" ; \\ echo "Error reconfiguring configuration sim" ; \\ rm -f "/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk\_Config.h" ; \\ exit 2 ; \\ fi \\ else \\ echo "Error: Configuration sim is incomplete.";\\ echo "Please check the files in /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data for error messages.";\\ echo "You can try again to configure using make sim-config";\\ echo "or delete this configuration with make sim-delete.";\\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ exit 1; \\ fi \\ fi if $perl -e 'exit \(\(stat shift$\[9\] > $stat shift$\[9\]\)' /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-info /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/force-reconfigure\); then \\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ echo "Cactus - version: 4.17.0";\\ echo "Error: Configuration sim is out of date.";\\ echo " Please reconfigure your configuration by running the command"; \\ echo ;\\ echo " make sim-reconfig"; \\ echo ;\\ echo " $It is likely that recent changes to the flesh require this.$";\\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ exit 1;\\ fi if test "x0" = "x0" ; then \\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ echo "Cactus - version: 4.17.0"; \\ echo "Building configuration sim"; \\ echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_;\\ fi --- Cactus - version: 4.17.0 Building configuration sim --- make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CCTK\_HOME=/labshare/users\_team/suoning/新建文件夹/Cactus rebuild make\[1\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus” make\[1\]: 对“rebuild”无需做任何事。 make\[1\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus” make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CCTK\_HOME=/labshare/users\_team/suoning/新建文件夹/Cactus make\[1\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus” Checking status of thorn zlib --- make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib” if \[ ! -d ./ \] ; then mkdir -p ./ ; fi cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/zlib/src THORN=zlib USESTHORNS="" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib” make\[3\]: “make.checked”已是最新。 make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib” cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/zlib THORN=zlib USESTHORNS="" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk\_Bindings” make\[3\]: “make.checked”已是最新。 make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk\_Bindings” make\[2\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib” echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_ --- Checking status of thorn hwloc --- make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” if \[ ! -d ./ \] ; then mkdir -p ./ ; fi echo CCTK\_THIS\_SUBDIR := ./ > make.identity if \[ ! -d cctk\_Bindings/ \] ; then mkdir -p cctk\_Bindings/ ; fi echo CCTK\_THIS\_SUBDIR := cctk\_Bindings/ > cctk\_Bindings/make.identity if \[ ! -d ./ \] ; then mkdir -p ./ ; fi cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src THORN=hwloc USESTHORNS="zlib" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” gcc -E -M -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC\_UTILPATH='/labshare/users\_team/suoning/新建文件夹/Cactus/exe/sim' -DHWLOC\_VERSION\_PKGCONFIG='"2.10.0"' /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -DCCODE > version.c.d perl -pi -e 's\{^\\s\*\\Qversion.o\\E\\s\*:\}\{version.c.o version.c.d:\}; s\{\\s\+\\S\*[/\\\\](CParameterStructNames%5C.h)\\b\}\{\}g' version.c.d 1734423130\.93969 Preprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c \{ if test no = 'yes'; then echo '#line 1 "'/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c'"'; fi; cat /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c; \} | perl -s /labshare/users\_team/suoning/新建文件夹/Cactus/lib/sbin/c\_file\_processor.pl -line\_directives=no -source\_file\_name=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data > version.c 1734423130\.98201 Compiling /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c current\_wd=`pwd` ; cd /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC\_UTILPATH='/labshare/users\_team/suoning/新建文件夹/Cactus/exe/sim' -DHWLOC\_VERSION\_PKGCONFIG='"2.10.0"' -c -o $current\_wd/version.c.o $current\_wd/version.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -DCCODE 1734423131\.14617 Postprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c --- echo "" > make.checked make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc THORN=hwloc USESTHORNS="zlib" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk\_Bindings” gcc -E -M -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -DCCODE > cctk\_ThornBindings.c.d perl -pi -e 's\{^\\s\*\\Qcctk\_ThornBindings.o\\E\\s\*:\}\{cctk\_ThornBindings.c.o cctk\_ThornBindings.c.d:\}; s\{\\s\+\\S\*[/\\\\](CParameterStructNames%5C.h)\\b\}\{\}g' cctk\_ThornBindings.c.d 1734423131\.36676 Preprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c \{ if test no = 'yes'; then echo '#line 1 "'/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c'"'; fi; cat /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c; \} | perl -s /labshare/users\_team/suoning/新建文件夹/Cactus/lib/sbin/c\_file\_processor.pl -line\_directives=no -source\_file\_name=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data > cctk\_ThornBindings.c 1734423131\.3964 Compiling /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c current\_wd=`pwd` ; cd /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -c -o $current\_wd/cctk\_ThornBindings.c.o $current\_wd/cctk\_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH\_GZFILEOP" -I"-DLZMA\_API\_STATIC" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -DCCODE 1734423131\.49924 Postprocessing /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk\_ThornBindings.c --- echo "" > make.checked make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk\_Bindings” if \[ -r /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a \] ; then echo Updating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; else echo Creating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; fi Creating /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a rm -f /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a make -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.thornlib /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” echo .[//version.c.o](//version.c.o) cctk\_Bindings//cctk\_ThornBindings.c.o > /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” xargs -n 10000 ar rcs /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a < /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a.objectlist if test "xno" = "xyes" ; then ranlib -cs /labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn\_hwloc.a ; fi echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_ --- make\[2\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc” echo \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_ --- Checking status of thorn MPI --- make\[2\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI” if \[ ! -d ./ \] ; then mkdir -p ./ ; fi echo CCTK\_THIS\_SUBDIR := ./ > make.identity if \[ ! -d cctk\_Bindings/ \] ; then mkdir -p cctk\_Bindings/ ; fi echo CCTK\_THIS\_SUBDIR := cctk\_Bindings/ > cctk\_Bindings/make.identity if \[ ! -d ./ \] ; then mkdir -p ./ ; fi cd ./ ; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/MPI/src THORN=MPI USESTHORNS="hwloc" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI” echo "" > make.checked make\[3\]: 离开目录“/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI” cd cctk\_Bindings; make CCTK\_TARGET=make.checked TOP=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users\_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/MPI THORN=MPI USESTHORNS="hwloc" -f /labshare/users\_team/suoning/新建文件夹/Cactus/lib/make/make.subdir make\[3\]: 进入目录“/labshare/users\_team/suoning/新建文件夹/Cactus/conf -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2837: Building the Einstein Toolkit
by Suo-Ning Wang 16 Dec '24

16 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Suo-Ning Wang): I use linux system on Ubuntu. I found my problem, and one file could not be updated. ![](https://bitbucket.org/repo/8zBLME5/images/274521210-95c2fbb4-f104-4b7f-93bc-27a67bb504b6.png) ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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#2414: include con2prim framework by Siegel, Moesta et al. into ET
by Roland Haas 16 Dec '24

16 Dec '24

#2414: include con2prim framework by Siegel, Moesta et al. into ET Reporter: Roland Haas Status: on hold Milestone: Version: Type: proposal Priority: major Component: EinsteinToolkit thorn Comment (by Roland Haas): @{557058:4b0c8315-696b-4d2e-92da-2da5fea9e8d4} @{5b5a53bbe288ee2d9b4ba957} @{557058:8bc23f2a-45c0-477d-8ac4-a5a16c734278} are any of these efforts still “alive” or have matured to the point where they could be made public? -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2414/include-con2prim-…

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#2837: Building the Einstein Toolkit
by Roland Haas 16 Dec '24

16 Dec '24

#2837: Building the Einstein Toolkit Reporter: Suo-Ning Wang Status: open Milestone: Version: Type: bug Priority: major Component: Comment (by Roland Haas): Hello Suo-Ning Wang, that looks likes something went wrong in ADIOS2’s compilation and configuration stage. I have unfortunately not seen that specific error before. Could you take a look at [http://einsteintoolkit.org/support.html#general-guidelines-for-questions](h… follow the steps there and attach the file `make.log` produced there? ‌ -- Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-eins…

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