[ET Trac] #2837: Building the Einstein Toolkit

17 Dec 2024


      #2837: Building the Einstein Toolkit
Reporter: Suo-Ning Wang
   Status: open
Milestone: 
  Version: 
     Type: bug
 Priority: major
Component:
Comment (by Suo-Ning Wang):
Using configuration: sim  
Building sim  
if test ! -f "/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk_Config.h" ; then \  
    echo ________________________________________________________________________;\  
  echo "Cactus - version: 4.17.0";\  
          if test "x"yes"" = 'xno'; then\  
            if (!  perl -s lib/make/setup_configuration.pl  sim) ; then \  
              echo "" ;                                                        \  
              echo "Error reconfiguring configuration sim" ;                    \  
              rm -f "/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data/cctk_Config.h" ;            \  
              exit 2 ;                                                         \  
            fi                                                                 \  
          else                                                                 \  
    echo "Error: Configuration sim is incomplete.";\  
    echo "Please check the files in /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data for error messages.";\  
    echo "You can try again to configure using make sim-config";\  
    echo "or delete this configuration with make sim-delete.";\  
    	echo ________________________________________________________________________;\  
    exit 1; \  
          fi                                                                 \  
fi  
if (perl -e 'exit ((stat shift)[9] > (stat shift)[9])' /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-info /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/force-reconfigure); then    \  
    echo ________________________________________________________________________;\  
  echo "Cactus - version: 4.17.0";\  
  echo "Error: Configuration sim is out of date.";\  
  echo "  Please reconfigure your configuration by running the command"; \  
          echo ;\  
          echo "    make sim-reconfig"; \  
          echo ;\  
  echo "  (It is likely that recent changes to the flesh require this.)";\  
    echo ________________________________________________________________________;\  
  exit 1;\  
fi  
if test "x0" = "x0" ; then \  
    echo ________________________________________________________________________;\  
  echo "Cactus - version: 4.17.0"; \  
  echo "Building configuration sim"; \  
    echo ________________________________________________________________________;\  
fi
---
Cactus - version: 4.17.0  
Building configuration sim
---
make -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CCTK_HOME=/labshare/users_team/suoning/新建文件夹/Cactus  rebuild  
make[1]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus”  
make[1]: 对“rebuild”无需做任何事。  
make[1]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus”  
make -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.configuration TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CCTK_HOME=/labshare/users_team/suoning/新建文件夹/Cactus  
make[1]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus”  
Checking status of thorn zlib
---
make[2]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
if [ ! -d ./ ] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/zlib/src THORN=zlib USESTHORNS="" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
make[3]: “make.checked”已是最新。  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
cd cctk_Bindings; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/zlib THORN=zlib USESTHORNS="" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk_Bindings”  
make[3]: “make.checked”已是最新。  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib/cctk_Bindings”  
make[2]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/zlib”  
echo ________________________________________________________________________
---
Checking status of thorn hwloc
---
make[2]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
if [ ! -d ./ ] ; then mkdir -p ./ ; fi  
echo CCTK_THIS_SUBDIR := ./ > make.identity  
if [ ! -d cctk_Bindings/ ] ; then mkdir -p cctk_Bindings/ ; fi  
echo CCTK_THIS_SUBDIR := cctk_Bindings/ > cctk_Bindings/make.identity  
if [ ! -d ./ ] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src THORN=hwloc USESTHORNS="zlib" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
gcc -E -M  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC_UTILPATH='/labshare/users_team/suoning/新建文件夹/Cactus/exe/sim'    -DHWLOC_VERSION_PKGCONFIG='"2.10.0"'   /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE > version.c.d  
perl -pi -e 's{^\s*\Qversion.o\E\s*:}{version.c.o version.c.d:}; s{\s+\S*[/\\](CParameterStructNames%5C.h)\b}{}g' version.c.d  
1734423130.93969 Preprocessing /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c  
{ if test no = 'yes'; then echo '#line 1 "'/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c'"'; fi; cat /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c; } | perl -s /labshare/users_team/suoning/新建文件夹/Cactus/lib/sbin/c_file_processor.pl -line_directives=no -source_file_name=/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data > version.c  
1734423130.98201 Compiling /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c  
current_wd=`pwd` ; cd /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -DHWLOC_UTILPATH='/labshare/users_team/suoning/新建文件夹/Cactus/exe/sim'    -DHWLOC_VERSION_PKGCONFIG='"2.10.0"'   -c -o $current_wd/version.c.o $current_wd/version.c -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE  
1734423131.14617 Postprocessing /labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src/version.c
---
echo "" > make.checked  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
cd cctk_Bindings; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc THORN=hwloc USESTHORNS="zlib" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk_Bindings”  
gcc -E -M  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE > cctk_ThornBindings.c.d  
perl -pi -e 's{^\s*\Qcctk_ThornBindings.o\E\s*:}{cctk_ThornBindings.c.o cctk_ThornBindings.c.d:}; s{\s+\S*[/\\](CParameterStructNames%5C.h)\b}{}g' cctk_ThornBindings.c.d  
1734423131.36676 Preprocessing /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c  
{ if test no = 'yes'; then echo '#line 1 "'/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c'"'; fi; cat /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c; } | perl -s /labshare/users_team/suoning/新建文件夹/Cactus/lib/sbin/c_file_processor.pl -line_directives=no -source_file_name=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data > cctk_ThornBindings.c  
1734423131.3964 Compiling /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c  
current_wd=`pwd` ; cd /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/scratch ; gcc  -fopenmp -Wall -g -std=gnu99 -O2 -fopenmp -Wall -c -o $current_wd/cctk_ThornBindings.c.o $current_wd/cctk_ThornBindings.c -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/hwloc/src" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/src/include" -I"/labshare/users_team/suoning/新建文件夹/Cactus/arrangements" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/Configuration/Thorns" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc" -I"/usr/include/libxml2" -I"-DWITH_GZFILEOP" -I"-DLZMA_API_STATIC" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc" -I"/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/include/hwloc"  -DCCODE  
1734423131.49924 Postprocessing /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/hwloc/cctk_ThornBindings.c
---
echo "" > make.checked  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc/cctk_Bindings”  
if [ -r /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a ] ; then echo Updating /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a ; else echo Creating /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a ; fi  
Creating /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a  
rm -f /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a  
make -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.thornlib /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a.objectlist  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
echo .[//version.c.o](//version.c.o) cctk_Bindings//cctk_ThornBindings.c.o > /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a.objectlist  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
xargs -n 10000 ar rcs /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a < /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a.objectlist  
if test "xno" = "xyes" ; then ranlib -cs /labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/lib/libthorn_hwloc.a ; fi  
echo ________________________________________________________________________
---
make[2]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/hwloc”  
echo ________________________________________________________________________
---
Checking status of thorn MPI
---
make[2]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
if [ ! -d ./ ] ; then mkdir -p ./ ; fi  
echo CCTK_THIS_SUBDIR := ./ > make.identity  
if [ ! -d cctk_Bindings/ ] ; then mkdir -p cctk_Bindings/ ; fi  
echo CCTK_THIS_SUBDIR := cctk_Bindings/ > cctk_Bindings/make.identity  
if [ ! -d ./ ] ; then mkdir -p ./ ; fi  
cd ./ ; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/arrangements/ExternalLibraries/MPI/src THORN=MPI USESTHORNS="hwloc" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
echo "" > make.checked  
make[3]: 离开目录“/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/build/MPI”  
cd cctk_Bindings; make CCTK_TARGET=make.checked TOP=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim CONFIG=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/config-data SRCDIR=/labshare/users_team/suoning/新建文件夹/Cactus/configs/sim/bindings/build/MPI THORN=MPI USESTHORNS="hwloc" -f /labshare/users_team/suoning/新建文件夹/Cactus/lib/make/make.subdir  
make[3]: 进入目录“/labshare/users_team/suoning/新建文件夹/Cactus/conf
--
Ticket URL: https://bitbucket.org/einsteintoolkit/tickets/issues/2837/building-the-einst...

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[ET Trac] #2837: Building the Einstein Toolkit