Trac December 2014

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153 discussions

[Einstein Toolkit] #1045: URL field should be optional
by Einstein Toolkit 01 Sep '15

01 Sep '15

#1045: URL field should be optional ---------------------------+------------------------------------------------ Reporter: hinder | Owner: eric9 Type: defect | Status: new Priority: minor | Milestone: Component: GetComponents | Version: Keywords: | ---------------------------+------------------------------------------------ In a CRL file, it should be possible to have only an AUTH_URL field and omit the URL field, since it might be that there is no unauthenticated way to access the repository (e.g. for private repositories). At the moment, when I omit the URL field for a Git repository, the error message is: {{{ Use of uninitialized value $git_repo in substitution (s///) at ./GetComponents line 589. Use of uninitialized value $git_repo in substitution (s///) at ./GetComponents line 590. Use of uninitialized value $rec{"GIT_REPO"} in substitution (s///) at ./GetComponents line 593. Use of uninitialized value $rec{"GIT_REPO"} in substitution (s///) at ./GetComponents line 594. ... }}} -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1045> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #334: unsuccessful qsub not recognized / submit succeeds for finished simulation
by Einstein Toolkit 18 Aug '15

18 Aug '15

#334: unsuccessful qsub not recognized / submit succeeds for finished simulation ------------------------+--------------------------------------------------- Reporter: knarf | Owner: mthomas Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- python version: I submitted a simulation 'sim submit' but the corresponding qsub failed due to wrong numbers of procs/node (philip cluster). I changed the number given on the command line and did a 'sim submit' again, this time successful. Several things happend which I think could be done better: - the unsuccessful qsub was not detected during the new submit - it attempted a restart and didn't simply clean the unsuccessful submit - when trying the restart, it went ahead and queued the job, but this later failed when run with "cannot rerun a restart that has been finished". This could have been caught earlier - without the wait time in the queue. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/334> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1627: Merge rewrite branch of McLachlan
by Einstein Toolkit 14 Aug '15

14 Aug '15

#1627: Merge rewrite branch of McLachlan -----------------------------------+---------------------------------------- Reporter: eschnett | Owner: Type: enhancement | Status: new Priority: major | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: | -----------------------------------+---------------------------------------- We should merge the "rewrite" branch of McLachlan. To do before this merge: - Remove helper thorn - Add backward compatibility layer for parameters -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1627> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #649: simfactory should create the "simulations" directory
by Einstein Toolkit 14 Aug '15

14 Aug '15

#649: simfactory should create the "simulations" directory ------------------------+--------------------------------------------------- Reporter: rhaas | Owner: eschnett Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- when following the new users tutorial one gets: {{{ [rhaas@qb1 Cactus]$ ./simfactory/bin/sim submit static_tov --parfile=par/static_tov.par --procs=32 --walltime=8:0:0 Parameter file: /home/rhaas/Cactus/par/static_tov.par Error: could not access simulation base directory /scratch/rhaas/simulations for reading and writing Aborting Simfactory. [137450 refs] }}} This happens each time I set up a fresh simfactory on a machine. It might be useful if simfactory would create the simulation base directory if it does not exist. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/649> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1645: simfactory should create exe directory
by Einstein Toolkit 14 Aug '15

14 Aug '15

#1645: simfactory should create exe directory ------------------------+--------------------------------------------------- Reporter: rhaas | Owner: eschnett Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: development version Keywords: | ------------------------+--------------------------------------------------- Using virtual (--virtual) configuration one can wrap a Cactus config (or at least the parts that simfactory cares about) around an existing executable. Simfactory then copies the executable to exe/cactus_sim (or whatever), however it assumes that exe already exists. Since exe is not part of the Cactus checkout, simfactory needs to itself ensure that it exists. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1645> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1615: TOVSolver shares parameters from GRHydro
by Einstein Toolkit 13 Aug '15

13 Aug '15

#1615: TOVSolver shares parameters from GRHydro -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: TOVSolver | -----------------------------------+---------------------------------------- Zach Etienne was looking at TOVSolver to use it for a test case in IllinoisGRMHD (and to compare to GRHydro). He found that it Turns out all but one of the parameters that are shared with GRHydro are unused in TOVSolver: These need to be removed: USES real rho_abs_min USES real rho_rel_min USES REAL initial_rho_abs_min USES REAL initial_rho_rel_min USES REAL initial_atmosphere_factor and that the one shared parameter that is actually used is GRHydro_rho_central. My suggestion would to remove these dependencies so that the initial data thorn can be used with other evolution thorns. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1615> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1059: simfactory silent error
by Einstein Toolkit 13 Aug '15

13 Aug '15

#1059: simfactory silent error --------------------------------------+------------------------------------- Reporter: anonymous | Owner: eschnett Type: enhancement | Status: new Priority: optional | Milestone: Component: SimFactory | Version: Keywords: simfactory error message | --------------------------------------+------------------------------------- When sim submit -remote ... fails to queue a job because the allocation has been overdrawn, simfactory does not print any error message to screen (it is only hidden in the log file). Could it be made to print an error message to screen? -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1059> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #959: Move pthreads to ExternalLibraries
by Einstein Toolkit 13 Aug '15

13 Aug '15

#959: Move pthreads to ExternalLibraries -----------------------------------+---------------------------------------- Reporter: eschnett | Owner: Type: enhancement | Status: new Priority: major | Milestone: Component: EinsteinToolkit thorn | Version: Keywords: | -----------------------------------+---------------------------------------- We should move pthreads support to ExternalLibraries (or to the flesh). I have asked CCT to create the respective repository. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/959> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1579: GRHydro does not build on Blue Gene/Q
by Einstein Toolkit 09 Aug '15

09 Aug '15

#1579: GRHydro does not build on Blue Gene/Q ----------------------+----------------------------------------------------- Reporter: eschnett | Owner: Type: defect | Status: new Priority: major | Milestone: Component: Other | Version: development version Keywords: | ----------------------+----------------------------------------------------- Some of the C++ source files in GRHydro do not build on a Blue Gene/Q with IBM's compiler. The problem is that the compiler takes a very long time (>8h) even without (sic!) optimization. "The usual" playing with compiler options or changes to the source files had no effect. I consider this to be a bug in the compiler. A work-around may be to switch to Clang as C++ compiler. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1579> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #816: include SphericalHarmonicReconASCII from incoming in PITTNULLCode
by Einstein Toolkit 04 Aug '15

04 Aug '15

#816: include SphericalHarmonicReconASCII from incoming in PITTNULLCode -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: Type: enhancement | Status: new Priority: optional | Milestone: Component: EinsteinToolkit thorn | Version: Keywords: | -----------------------------------+---------------------------------------- Christian Reisswig provided a copy of SphericalHarmonicReconASCII and alternative thorn that reads in CCE boundary data (similar SphericalHarmonicRecon) but supporting a wider variety of input file formats (HDF5 among them, irrespective of the name). Used by SpEC and Llama. There are no docs or test cases as of now. Test data would be welcome (SpEC, Llama or Cactus provided, I don't think it makes a difference). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/816> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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Trac December 2014