Hello,
I need help with configuring and compiling Cactus on BigGreen, a local cluster at Marshall University. uname -a Linux biggreen.marshall.edu 2.6.32-71.7.1.el6.x86_64 #1 SMP Mon Jun 27 07:24:50 BST 2011 x86_64 x86_64 x86_64 GNU/Linux
Other specifications are: 276 central processing unit cores, 552 gigabytes of memory, 10 terabytes of storage, 8 NVidia Tesla graphics processing units with 448 cores.
I am using a generic configuration: CPP = cpp FPP = cpp CC = gcc CXX = g++ F77 = gfortran F90 = gfortran
FPPFLAGS = -traditional CFLAGS = -std=gnu99
OPTIMISE = yes CPP_OPTIMISE_FLAGS = C_OPTIMISE_FLAGS = -O2 CXX_OPTIMISE_FLAGS = -O2
OPENMP = yes CPP_OPENMP_FLAGS = -openmp FPP_OPENMP_FLAGS = -fopenmp C_OPENMP_FLAGS = -openmp CXX_OPENMP_FLAGS = -openmp F77_OPENMP_FLAGS = -openmp F90_OPENMP_FLAGS = -openmp
WARN = yes CPP_WARN_FLAGS = -Wall C_WARN_FLAGS = -Wall CXX_WARN_FLAGS = -Wall
#enable MPI MPI = OpenMPI OPENMPI_DIR = /opt/openmpi #OPENMPI_DIR = openmpi/1.4.3
HDF5_DIR=BUILD
The errors I'm getting are: ------------------------------------------------------ There were 4 errors during execution of the CST These must be corrected before compilation can proceed ------------------------------------------------------
------------------------------------------------------ Warnings were generated during execution of the CST ------------------------------------------------------
CST error 1: -> Configuration script for thorn FFTW3 returned exit code 1 (no error message)
CST error 2: -> Configuration script for thorn GSL returned exit code 1 (no error message)
CST error 3: -> Configuration script for thorn LORENE returned exit code 1 (no error message)
CST error 4: -> Configuration script for thorn HDF5 returned exit code 1 (no error message)
Maria
All the OPENMP flags should be -fopenmp, not -openmp.
-erik
On Fri, Jun 1, 2012 at 3:26 PM, Babiuc-Hamilton, Maria babiuc@marshall.edu wrote:
Hello,
I need help with configuring and compiling Cactus on BigGreen, a local cluster at Marshall University. uname -a Linux biggreen.marshall.edu 2.6.32-71.7.1.el6.x86_64 #1 SMP Mon Jun 27 07:24:50 BST 2011 x86_64 x86_64 x86_64 GNU/Linux
Other specifications are: 276 central processing unit cores, 552 gigabytes of memory, 10 terabytes of storage, 8 NVidia Tesla graphics processing units with 448 cores.
I am using a generic configuration: CPP = cpp FPP = cpp CC = gcc CXX = g++ F77 = gfortran F90 = gfortran
FPPFLAGS = -traditional CFLAGS = -std=gnu99
OPTIMISE = yes CPP_OPTIMISE_FLAGS = C_OPTIMISE_FLAGS = -O2 CXX_OPTIMISE_FLAGS = -O2
OPENMP = yes CPP_OPENMP_FLAGS = -openmp FPP_OPENMP_FLAGS = -fopenmp C_OPENMP_FLAGS = -openmp CXX_OPENMP_FLAGS = -openmp F77_OPENMP_FLAGS = -openmp F90_OPENMP_FLAGS = -openmp
WARN = yes CPP_WARN_FLAGS = -Wall C_WARN_FLAGS = -Wall CXX_WARN_FLAGS = -Wall
#enable MPI MPI = OpenMPI OPENMPI_DIR = /opt/openmpi #OPENMPI_DIR = openmpi/1.4.3
HDF5_DIR=BUILD
The errors I'm getting are:
There were 4 errors during execution of the CST These must be corrected before compilation can proceed
Warnings were generated during execution of the CST
CST error 1: -> Configuration script for thorn FFTW3 returned exit code 1 (no error message)
CST error 2: -> Configuration script for thorn GSL returned exit code 1 (no error message)
CST error 3: -> Configuration script for thorn LORENE returned exit code 1 (no error message)
CST error 4: -> Configuration script for thorn HDF5 returned exit code 1 (no error message)
Users mailing list Users@einsteintoolkit.org http://lists.einsteintoolkit.org/mailman/listinfo/users
Can we fix these to give better error messages?
The errors come from external libraries.
One of the problem is that the option "-openmp" is interpreted as "-o penmp", which has a very different meaning, but is a legal option and thus does not trigger a compiler error.
-erik
On Fri, Jun 1, 2012 at 5:44 PM, Ian Hinder ian.hinder@aei.mpg.de wrote:
Can we fix these to give better error messages?
-- Ian Hinder ian.hinder@aei.mpg.de
----- Original message -----
Maria
All the OPENMP flags should be -fopenmp, not -openmp.
-erik
On Fri, Jun 1, 2012 at 3:26 PM, Babiuc-Hamilton, Maria babiuc@marshall.edu wrote:
Hello,
I need help with configuring and compiling Cactus on BigGreen, a local cluster at Marshall University. uname -a Linux biggreen.marshall.edu 2.6.32-71.7.1.el6.x86_64 #1 SMP Mon Jun 27 07:24:50 BST 2011 x86_64 x86_64 x86_64 GNU/Linux
Other specifications are: 276 central processing unit cores, 552 gigabytes of memory, 10 terabytes of storage, 8 NVidia Tesla graphics processing units with 448 cores.
I am using a generic configuration: CPP = cpp FPP = cpp CC = gcc CXX = g++ F77 = gfortran F90 = gfortran
FPPFLAGS = -traditional CFLAGS = -std=gnu99
OPTIMISE = yes CPP_OPTIMISE_FLAGS = C_OPTIMISE_FLAGS = -O2 CXX_OPTIMISE_FLAGS = -O2
OPENMP = yes CPP_OPENMP_FLAGS = -openmp FPP_OPENMP_FLAGS = -fopenmp C_OPENMP_FLAGS = -openmp CXX_OPENMP_FLAGS = -openmp F77_OPENMP_FLAGS = -openmp F90_OPENMP_FLAGS = -openmp
WARN = yes CPP_WARN_FLAGS = -Wall C_WARN_FLAGS = -Wall CXX_WARN_FLAGS = -Wall
#enable MPI MPI = OpenMPI OPENMPI_DIR = /opt/openmpi #OPENMPI_DIR = openmpi/1.4.3
HDF5_DIR=BUILD
The errors I'm getting are:
There were 4 errors during execution of the CST These must be corrected before compilation can proceed
Warnings were generated during execution of the CST
CST error 1: -> Configuration script for thorn FFTW3 returned exit code 1 (no error message)
CST error 2: -> Configuration script for thorn GSL returned exit code 1 (no error message)
CST error 3: -> Configuration script for thorn LORENE returned exit code 1 (no error message)
CST error 4: -> Configuration script for thorn HDF5 returned exit code 1 (no error message)
Users mailing list Users@einsteintoolkit.org http://lists.einsteintoolkit.org/mailman/listinfo/users
-- Erik Schnetter schnetter@cct.lsu.edu http://www.perimeterinstitute.ca/personal/eschnetter/ _______________________________________________ Users mailing list Users@einsteintoolkit.org http://lists.einsteintoolkit.org/mailman/listinfo/users
Thanks, that fixed it! :) Maria ________________________________________ From: Erik Schnetter [schnetter@cct.lsu.edu] Sent: Friday, June 01, 2012 3:59 PM To: Babiuc-Hamilton, Maria Cc: users@einsteintoolkit.org Subject: Re: [Users] help with configuration on local cluster?
Maria
All the OPENMP flags should be -fopenmp, not -openmp.
-erik
On Fri, Jun 1, 2012 at 3:26 PM, Babiuc-Hamilton, Maria babiuc@marshall.edu wrote:
Hello,
I need help with configuring and compiling Cactus on BigGreen, a local cluster at Marshall University. uname -a Linux biggreen.marshall.edu 2.6.32-71.7.1.el6.x86_64 #1 SMP Mon Jun 27 07:24:50 BST 2011 x86_64 x86_64 x86_64 GNU/Linux
Other specifications are: 276 central processing unit cores, 552 gigabytes of memory, 10 terabytes of storage, 8 NVidia Tesla graphics processing units with 448 cores.
I am using a generic configuration: CPP = cpp FPP = cpp CC = gcc CXX = g++ F77 = gfortran F90 = gfortran
FPPFLAGS = -traditional CFLAGS = -std=gnu99
OPTIMISE = yes CPP_OPTIMISE_FLAGS = C_OPTIMISE_FLAGS = -O2 CXX_OPTIMISE_FLAGS = -O2
OPENMP = yes CPP_OPENMP_FLAGS = -openmp FPP_OPENMP_FLAGS = -fopenmp C_OPENMP_FLAGS = -openmp CXX_OPENMP_FLAGS = -openmp F77_OPENMP_FLAGS = -openmp F90_OPENMP_FLAGS = -openmp
WARN = yes CPP_WARN_FLAGS = -Wall C_WARN_FLAGS = -Wall CXX_WARN_FLAGS = -Wall
#enable MPI MPI = OpenMPI OPENMPI_DIR = /opt/openmpi #OPENMPI_DIR = openmpi/1.4.3
HDF5_DIR=BUILD
The errors I'm getting are:
There were 4 errors during execution of the CST These must be corrected before compilation can proceed
Warnings were generated during execution of the CST
CST error 1: -> Configuration script for thorn FFTW3 returned exit code 1 (no error message)
CST error 2: -> Configuration script for thorn GSL returned exit code 1 (no error message)
CST error 3: -> Configuration script for thorn LORENE returned exit code 1 (no error message)
CST error 4: -> Configuration script for thorn HDF5 returned exit code 1 (no error message)
Users mailing list Users@einsteintoolkit.org http://lists.einsteintoolkit.org/mailman/listinfo/users
-- Erik Schnetter schnetter@cct.lsu.edu http://www.perimeterinstitute.ca/personal/eschnetter/
users@lists.einsteintoolkit.org
-
Babiuc-Hamilton, Maria -
Erik Schnetter -
Ian Hinder