Hello Yosef,
Are all of them there? I didn't see a patch for the SphericalHarmonicDecomp, Recomp codes?
They are all I have. There were patches to Christian Reisswig's SphericalHarmonicReconASCII in incoming. Since then the thorn has changed names to SphericalHarmonicReconGen. Unfortunately I don't think any of these will help with a run that produces faulty output from Cactus (since the input to CCE for Caltech came from SpEC).
I believe the most important patch is the one that fixes a problem with the start-up algorithm at the worldtube. None of the patches affects the SphericalHarmonicRecon/Decomp thorns.
Indeed, at Caltech, we are using SphericalHarmonicReconGen (formerly SphericalHarmonicReconASCII) which can read the data from the SpEC code. This thorn should be located in the incoming directory and I hope it can make it to the next release.
So I believe your problems will not be fixed by the changes listed in ticket 991.
cheers, Christian