Dear all,
I need some guidance on reproducing the NsNsToHMNS which is provided in the gallery section of ET's website. but there are a bunch of warnings during the simulation.
I would be grateful if anyone could possibly tell me what is the minimum limit on core numbers for the NsNs and also check the warnings below.
I tried with 4 procs at first , but now I am trying on 28 procs. but there are same warnings. I don't know if I have to take them serious or not ! Because even with these warnings, the simulation is still running...
Gratefully, Hassan
*****Here are all warnings***** :
Warning: thorn CoordBase already scheduled for activation
WARNING level 3 from host compute-0-46.local process 0 while executing schedule bin (none), routine (no thorn)::(no routine) in thorn IOUtil, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/IOUtil/CheckpointRecovery.cc:730: -> No HDF5 checkpoint files with basefilename 'checkpoint.chkpt' found in recovery directory 'NsNs'
Formaline::Formaline_RegisterWarnings: [meta] Register to receive warnings and info messages from the flesh
WARNING level 3 from host compute-0-46.local process 0 while executing schedule bin CCTK_STARTUP, routine TerminationTrigger::TerminationTrigger_StartSignalHandler in thorn TerminationTrigger, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/TerminationTrigger/signal.c:64: -> Could not register parameter change monitor for 'signal_numbers' INFO (Vectors): Using vector size 2 for architecture SSE2 (64-bit precision)
INFO (Formaline): Writing tarballs with the Cactus sources into the directory "NsNs/cactus-source" WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15: -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas" because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas" WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28: -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because ML_BSSN::my_rhs_boundary_condition="NewRad" WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47: -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never" WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116: -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0 WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134: -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0 WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150: -> Parameter ML_BSSN::my_initial_data is outdated; please update the parameter file. Do not use this parameter, and set up initial conditions via ADMBase as usual. WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157: -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up initial boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164: -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171: -> Parameter ML_BSSN::my_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198: -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectLapse. WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204: -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectShift. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15: -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas" because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28: -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because ML_BSSN::my_rhs_boundary_condition="NewRad" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47: -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:15: -> Forcing ML_BSSN::initial_boundary_condition="extrapolate-gammas" because ML_BSSN::my_initial_boundary_condition="extrapolate-gammas" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:28: -> Forcing ML_BSSN::rhs_boundary_condition="NewRad" because ML_BSSN::my_rhs_boundary_condition="NewRad" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:47: -> Forcing ML_BSSN::epsDiss=0.0 because ML_BSSN::apply_dissipation="never" WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116: -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0 WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:116: -> Forcing ML_BSSN::advectLapse=1 because ML_BSSN::LapseAdvectionCoeff=1.0 WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134: -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0 WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_WRAGH, routine ML_BSSN_Helper::ML_BSSN_ParamCompat in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:134: -> Forcing ML_BSSN::advectShift=1 because ML_BSSN::ShiftAdvectionCoeff=1.0 INFO (MoL): Using Runge-Kutta 4 as the time integrator. INFO (SymBase): Symmetry on lower x-face: rotating_symmetry_180 INFO (SymBase): Symmetry on lower z-face: reflection_symmetry INFO (MoL): The maximum number of evolved variables is 1250. 30 are registered. INFO (MoL): The maximum number of slow evolved variables is 1250. 0 are registered. INFO (MoL): The maximum number of constrained variables is 1250. 37 are registered. INFO (MoL): The maximum number of SandR variables is 1250. 0 are registered. INFO (MoL): The maximum number of evolved array variables is 1250. 0 are registered. INFO (MoL): The maximum number of constrained array variables is 1250. 0 are registered. INFO (MoL): The maximum number of SandR array variables is 1250. 0 are registered. INFO (MoL): The maximum size of any array variables is 0. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150: -> Parameter ML_BSSN::my_initial_data is outdated; please update the parameter file. Do not use this parameter, and set up initial conditions via ADMBase as usual. WARNING level 1 from host compute-0-46.local process 0 WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:150: -> Parameter ML_BSSN::my_initial_data is outdated; please update the parameter file. Do not use this parameter, and set up initial conditions via ADMBase as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157: -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up initial boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164: -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171: -> Parameter ML_BSSN::my_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198: -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectLapse. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204: -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectShift. while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:157: -> Parameter ML_BSSN::my_initial_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up initial boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:164: -> Parameter ML_BSSN::my_rhs_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:171: -> Parameter ML_BSSN::my_boundary_condition is outdated; please update the parameter file. Do not use this parameter, and set up RHS boundary conditions as usual. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:198: -> Parameter ML_BSSN::LapseAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectLapse. WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin CCTK_PARAMCHECK, routine ML_BSSN_Helper::ML_BSSN_ParamCheck in thorn ML_BSSN_Helper, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/ML_BSSN_Helper/Parameters.c:204: -> Parameter ML_BSSN::ShiftAdvectionCoeff is outdated; please update the parameter file. Instead of using this parameter, you should set ML_BSSN::advectShift.
WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin Hydro_Analysis_LocationSearch, routine Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine in thorn Hydro_Analysis, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199: -> Found more than one (2) identical maximum, using average location (15.1875,0,0). WARNING level 1 from host compute-0-46.local process 1 while executing schedule bin Hydro_Analysis_LocationSearch, routine Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine in thorn Hydro_Analysis, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199: -> Found more than one (2) identical maximum, using average location (15.1875,0,0). WARNING level 1 from host compute-0-46.local process 0 while executing schedule bin Hydro_Analysis_LocationSearch, routine Hydro_Analysis::Hydro_Analysis_LocationSearch_Combine in thorn Hydro_Analysis, file /home/hassan.khalvati.physics.sharif/NsNs/Cactus/configs/sim/build/Hydro_Analysis/Hydro_Analysis.c:199: -> Found more than one (2) identical maximum, using average location (15.1875,0,0). INFO (NSTracker): Found star at (15.1875,0,0) INFO (CarpetIOHDF5): --------------------------------------------------------- INFO (CarpetIOHDF5): Dumping initial checkpoint at iteration 0, simulation time 0 INFO (CarpetIOHDF5): --------------------------------------------------------- WARNING level 2 from host compute-0-46.local process 0 while executing schedule bin CCTK_ANALYSIS, routine QuasiLocalMeasures::qlm_calculate in thorn QuasiLocalMeasures, file qlm_calculate.F90:130: -> There were not enough past time levels available for accurate calculations INFO (TimerReport): Timer Report at iteration 0 time 0 INFO (TimerReport): Top timers at iteration 0 time 0
----------------------------------- Hassan Khalvati Master Student Department of Physics Sharif University of Technology Tehran, Azadi Hassan.khalvati@physics.sharif.edu