Trac December 2010

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102 discussions

[Einstein Toolkit] #159: Rename --replacement to --replace, --substitution to --substitute
by Einstein Toolkit 23 Dec '10

23 Dec '10

#159: Rename --replacement to --replace, --substitution to --substitute ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: major | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- The option names should be verbs, not nouns. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/159> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #109: Restart fails
by Einstein Toolkit 23 Dec '10

23 Dec '10

#109: Restart fails ------------------------+--------------------------------------------------- Reporter: anonymous | Owner: mthomas Type: defect | Status: new Priority: blocker | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- A simulation restart with SimFactory failed with the following error message: DEBUG: checkpoint file: /work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0000/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 file=/work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0000/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 dfile=/work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0001/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 DEBUG: linking /work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0000/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 to /work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0001/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 before link Error: Could not link checkpoint file /work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0000/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 to /work/eschnett/philip/simulations/d3.0-mclachlan-i0031/output-0001/d3.0-mclachlan/checkpoint.chkpt.it_0.h5 -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/109> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #94: Add CCTK_VECTGFINDEX3D and friends...
by Einstein Toolkit 22 Dec '10

22 Dec '10

#94: Add CCTK_VECTGFINDEX3D and friends... -------------------------+-------------------------------------------------- Reporter: eschnett | Owner: Type: enhancement | Status: new Priority: major | Milestone: Component: Cactus | Version: Keywords: | -------------------------+-------------------------------------------------- ... but wait until after the release. See <http://cactuscode.org/pipermail/patches/attachments/20091204/57952527> for the patch and the surrounding discussion. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/94> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #161: Support valgrind as debug/performance tool
by Einstein Toolkit 22 Dec '10

22 Dec '10

#161: Support valgrind as debug/performance tool -------------------------+-------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: enhancement | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | -------------------------+-------------------------------------------------- Support valgrind, in particular the --cachegrind tool, with SimFactory as a performance measurement tool. The cache characteristics should be taken out of the MDB. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/161> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #158: Logging in SimFactory
by Einstein Toolkit 22 Dec '10

22 Dec '10

#158: Logging in SimFactory ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: task | Status: new Priority: critical | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- The logging facility in SimFactory is supposed to keep track of all actions performed on a simulation. That is, there needs to be exactly one log file per simulation. It is not necessary to have a log file within the Cactus source tree, since this file could go away at any time, and is not connected to any simulation. The log file should be created when a simulation is created. Only important actions -- actions that potentially modify the state of the simulation -- should be logged. For example, if a new restart is created, or if a restart is stopped, or if a simulation is archived, then this should be logged. If a simulation is only examined, then this should not be logged. Python has a convenient logging facility. This should be used if possible. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/158> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #79: Running on Damiana fails
by Einstein Toolkit 21 Dec '10

21 Dec '10

#79: Running on Damiana fails --------------------------------------+------------------------------------- Reporter: barry.wardell@… | Owner: mthomas Type: defect | Status: new Priority: blocker | Milestone: Component: SimFactory | Version: Keywords: | --------------------------------------+------------------------------------- The compute nodes on Damiana are named nodeXXX, which does not match the aliaspattern for Damiana in the mdb. The quick fix is to change the aliaspattern to: aliaspattern = ^(((login-)?damiana)|(sl-\d\d)|node\d\d\d)(\.aei\.mpg\.de|\.damiana\.admin)?$ although this might interfere with other machines which also have their compute nodes named nodeXXX. A better fix would probably be to add a --machine=... option when running so that SimFactory does not need to guess which machine it's on from the aliaspattern. I believe a similar problem also affects Kraken. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/79> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #151: simfactory.org is down
by Einstein Toolkit 21 Dec '10

21 Dec '10

#151: simfactory.org is down ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: critical | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- The web site simfactory.org shows only the default Apache screen. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/151> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #130: Add --machine=... option to all submit scripts
by Einstein Toolkit 21 Dec '10

21 Dec '10

#130: Add --machine=... option to all submit scripts ------------------------+--------------------------------------------------- Reporter: eschnett | Owner: mthomas Type: defect | Status: new Priority: major | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- We need to add a --machine=... option to all submit script, so that the aliaspatterns don't need to match the compute nodes' names any more. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/130> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #86: Sync fails, the outputs "sync done"
by Einstein Toolkit 21 Dec '10

21 Dec '10

#86: Sync fails, the outputs "sync done" ------------------------+--------------------------------------------------- Reporter: anonymous | Owner: mthomas Type: defect | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | ------------------------+--------------------------------------------------- In a situation where syncing to a remote machine fails, SimFactory prints the error message from rsync, and then continus to output "Sync complete." It should not do this -- it should either abort after the rsync error, or should output an error message. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/86> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #81: Rename --remotemachine= to --remote
by Einstein Toolkit 21 Dec '10

21 Dec '10

#81: Rename --remotemachine= to --remote --------------------------------------+------------------------------------- Reporter: barry.wardell@… | Owner: mthomas Type: enhancement | Status: new Priority: minor | Milestone: Component: SimFactory | Version: Keywords: | --------------------------------------+------------------------------------- With the perl version of simfactory, it was possible to run remote commands using eg. 'sim remote damiana submit...'. The new version doesn't seem to have this and it is necessary to use --remotemachine=... instead, which is a bit more annoying to type. It would be nice to add 'sim remote' to the new simfactory, or as Erik suggests: I suggest to rename "--remotemachine" to "--remote"; this would allow the syntax sim --remote damiana submit ... -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/81> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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Trac December 2010