Trac November 2015

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[Einstein Toolkit] #1837: LocalInterp2 symmetry test fails on intel compiler machine
by Einstein Toolkit 19 Apr '16

19 Apr '16

#1837: LocalInterp2 symmetry test fails on intel compiler machine -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: LocalInterp2 | -----------------------------------+---------------------------------------- The intel compiler by default aggressively optimizes expressions, which causes failures in the delicate cancellations required for LocalInterp2's symmetry test. The attached patch changes compiler options for the affected file only. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1837> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #702: Tests should use IO::out_fileinfo = "none"
by Einstein Toolkit 18 Apr '16

18 Apr '16

#702: Tests should use IO::out_fileinfo = "none" -------------------------+-------------------------------------------------- Reporter: hinder | Owner: Type: enhancement | Status: new Priority: minor | Milestone: Component: Other | Version: Keywords: | -------------------------+-------------------------------------------------- The Cactus User Guide (http://einsteintoolkit.org/documentation/UsersGuide/UsersGuidech9.html#x13-…) recommends that test output files should always be the same, and hence use IO::out_fileinfo = "none". I would like to implement this for the tests in the ET, as it makes comparing test output using standard (non-Cactus testsuite mechanism) diff tools possible. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/702> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1631: The dgfe branch for McLachlan generates NaNs
by Einstein Toolkit 17 Apr '16

17 Apr '16

#1631: The dgfe branch for McLachlan generates NaNs -----------------------------------------------------------+---------------- Reporter: Jonah Miller <jonah.maxwell.miller@…> | Owner: eschnett Type: defect | Status: new Priority: optional | Milestone: ET_2014_11 Component: EinsteinToolkit thorn | Version: development version Keywords: dgfe,mclachlan,gamma driver | -----------------------------------------------------------+---------------- When one uses the gamma driver formulation in the dgfe branch of McLachlan and sets the shiftGammaCoefficient to zero, the runtime output has NaNs because the code divides by zero. A bit of flow control fixes this. Attached is a patch for the branch. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1631> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1646: McLachlan does not give a reference for the gauge evolution equations
by Einstein Toolkit 11 Apr '16

11 Apr '16

#1646: McLachlan does not give a reference for the gauge evolution equations -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: McLachlan | -----------------------------------+---------------------------------------- McLachlan_BSSN.m does not seem to contain any information (eg in evolCalc) that would tell me from which paper the different expressions for the shift and lapse evolution expression are taken from (which may be useful to understand what the different coefficients mean, since parsing the multiple factors of the type XXXFactor * AAA + (1-XXXFactor) * BBB to get either AAA or BBB is confusing). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1646> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1838: CactusUtils/WatchDog: is part of ET or not?
by Einstein Toolkit 01 Apr '16

01 Apr '16

#1838: CactusUtils/WatchDog: is part of ET or not? -----------------------------------+---------------------------------------- Reporter: bmundim | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: WatchDog | -----------------------------------+---------------------------------------- if yes, then: {{{ https://bitbucket.org/einsteintoolkit/manifest/pull-requests/6/add- cactusutils-watchdog-to-the-thornlist/diff }}} -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1838> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1840: ExternalLibraris/pthreads does not provide CCTK_PTHREADS define
by Einstein Toolkit 01 Apr '16

01 Apr '16

#1840: ExternalLibraris/pthreads does not provide CCTK_PTHREADS define -----------------------------------+---------------------------------------- Reporter: rhaas | Owner: rhaas Type: defect | Status: new Priority: major | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: pthreads | -----------------------------------+---------------------------------------- This means it is not a drop in replacement for the old mechanism and eg HTTPD complains at runtime with: {{{ WARNING level 1 from host comet-ln3.sdsc.edu process 0 while executing schedule bin HTTP_Startup, routine HTTPD::HTTP_StartServer in thorn HTTPD, file /home/rhaas/cactus/ET_trunk/arrangements/CactusConnect/HTTPD/src/Startup.c:97: -> Parameter 'HTTPD::use_pthreads' is set to "yes" but you didn't configure with PTHREADS. Setting will be ignored. }}} -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1840> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1676: Add CT_MultiLevel elliptic solver to the Einstein Toolkit
by Einstein Toolkit 08 Feb '16

08 Feb '16

#1676: Add CT_MultiLevel elliptic solver to the Einstein Toolkit -------------------------+-------------------------------------------------- Reporter: hinder | Owner: Type: enhancement | Status: new Priority: major | Milestone: Component: Other | Version: development version Keywords: | -------------------------+-------------------------------------------------- This elliptic solver (http://lists.einsteintoolkit.org/pipermail/users/2013-August/003174.html) is being used by more people now, and it would be good to have it in the toolkit. It has tests and documentation, and the author supports (though has not requested) inclusion (http://lists.einsteintoolkit.org/pipermail/users/2014-January/003425.html). -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1676> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1841: GRHydro tracers broken
by Einstein Toolkit 14 Dec '15

14 Dec '15

#1841: GRHydro tracers broken -----------------------------------+---------------------------------------- Reporter: I.Hawke@… | Owner: Type: defect | Status: new Priority: unset | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: GRHydro | -----------------------------------+---------------------------------------- The GRHydro::GRHydro_tracers group is not registered as a constrained variable with MoL in GRHydro. This means that, in runs with insufficient conserved variables and other memory settings, the first step through the loop sets NaNs for the tracers: they then fail to update (or, at least, not correctly). To fix this, add register_constrained("GRHydro::GRHydro_tracers"); on or around line 143 of GRHydro_RegisterVars.cc. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1841> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1832: Rewrite git handling in Formaline
by Einstein Toolkit 26 Nov '15

26 Nov '15

#1832: Rewrite git handling in Formaline -----------------------------------+---------------------------------------- Reporter: eschnett | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: | -----------------------------------+---------------------------------------- Handle git repositories in a single script, vastly simplifying the code. This also correct several error or inconsistencies along the way. - tar files are no longer recored in git (they lead to very large repositories) - the code is now serial (since git is serial anyway), so that locking the repo is no longer necessary - use the flesh's TAR variable instead of looking for tar - correct paths returned by "find" (git is picky about double slashes) See <https://bitbucket.org/cactuscode/cactusutils/pull-requests/4/handle- git-repositories-in-a-single-script/diff>. Fixes #1830. -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1832> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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[Einstein Toolkit] #1830: Formaline "Could not tag" warning when building on Datura
by Einstein Toolkit 23 Nov '15

23 Nov '15

#1830: Formaline "Could not tag" warning when building on Datura -----------------------------------+---------------------------------------- Reporter: hinder | Owner: Type: defect | Status: new Priority: minor | Milestone: Component: EinsteinToolkit thorn | Version: development version Keywords: Formaline | -----------------------------------+---------------------------------------- Building the ET on datura leads to an odd warning from formaline/git. {{{ Could not tag Command was /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/scratch/Formaline/bin /git-lock.pl /usr/bin/git tag 'build-sim-datura- ianhin-2015.10.23-10.51.01-2256' at /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/scratch/Formaline/bin /git-commit-everything.pl line 48. Formaline: WARNING: Error while committing to repository }}} Full output is below. {{{ Checking status of thorn CarpetRegrid Checking status of thorn CarpetRegrid2 Checking status of thorn CarpetSlab Checking status of thorn GRHydro Creating /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/lib/libthorn_CT_MultiLevel.a Checking status of thorn NoExcision Checking status of thorn PeriodicCarpet Checking status of thorn TestCarpetGridInfo Formaline: Adding thorn CT_MultiLevel to git repository... Creating Formaline tarball for thorn CT_MultiLevel COMPILING arrangements/EinsteinInitialData/NoExcision/src/getlevelinfo.cc Updating /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/lib/libthorn_NoExcision.a Formaline: Adding thorn NoExcision to git repository... Creating Formaline tarball for thorn NoExcision Formaline: Committing source tree to git repository... Could not tag Command was /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/scratch/Formaline/bin /git-lock.pl /usr/bin/git tag 'build-sim-datura- ianhin-2015.10.23-10.51.01-2256' at /home/ianhin/Cactus/EinsteinToolkitGit/configs/sim/scratch/Formaline/bin /git-commit-everything.pl line 48. Formaline: WARNING: Error while committing to repository Formaline: Pushing source tree to master git repository... Formaline: Pushing to local repository /home/ianhin/Cactus/EinsteinToolkitGit/../CactusSourceJar.git... Formaline: Done. Formaline: (Formaline has finished updating the git repositories. Formaline: If the build process seems to hang, some other command Formaline: is still running, e.g. the final link stage.) Creating Formaline tarball for thorn OpenBLAS Creating Formaline tarball for thorn HDF5 Creating Formaline tarball for thorn MPI ________________________________________________________________________ Creating cactus_sim in /home/ianhin/Cactus/EinsteinToolkitGit/exe from EinsteinAnalysis/ADMAnalysis EinsteinBase/ADMBase EinsteinBase/ADMCoupling EinsteinBase/ADMMacros EinsteinAnalysis/ADMMass Numerical/AEILocalInterp EinsteinAnalysis/AHFinder EinsteinAnalysis/AHFinderDirect CactusBase/Boundary CTThorns/CT_Analytic CTThorns/CT_MultiLevel EinsteinAnalysis/CalcK Carpet/Carpet Carpet/CarpetEvolutionMask Carpet/CarpetIOASCII Carpet/CarpetIOBasic Carpet/CarpetIOHDF5 Carpet/CarpetIOScalar Carpet/CarpetIntegrateTest Carpet/CarpetInterp Carpet/CarpetInterp2 Carpet/CarpetLib Carpet/CarpetMask Carpet/CarpetProlongateTest Carpet/CarpetReduce Carpet/CarpetRegrid Carpet/CarpetRegrid2 Carpet/CarpetRegridTest Carpet/CarpetSlab Carpet/CarpetTracker CactusBase/CartGrid3D CactusNumerical/Cartoon2D EinsteinBase/Constants WVUThorns/Convert_to_HydroBase CactusBase/CoordBase EinsteinBase/CoordGauge Carpet/CycleClock CactusExamples/DemoInterp CactusNumerical/Dissipation EinsteinInitialData/DistortedBHIVP EinsteinAnalysis/EHFinder EinsteinBase/EOS_Base EinsteinEOS/EOS_Hybrid EinsteinEOS/EOS_IdealFluid EinsteinEOS/EOS_Omni EinsteinEOS/EOS_Polytrope EinsteinExact/EinsteinExact_Test CactusElliptic/EllBase CactusElliptic/EllSOR EinsteinInitialData/Exact EinsteinAnalysis/Extract ExternalLibraries/FFTW3 CactusExamples/FleshInfo CactusUtils/Formaline CactusBase/Fortran EinsteinEvolve/GRHydro EinsteinEvolve/GRHydro_InitData ExternalLibraries/GSL EinsteinExact/GaugeWave KrancNumericalTools/GenericFD ExternalLibraries/HDF5 CactusConnect/HTTPD CactusConnect/HTTPDExtra CactusExamples/HelloWorld Carpet/HighOrderWaveTest EinsteinBase/HydroBase EinsteinAnalysis/Hydro_Analysis EinsteinInitialData/Hydro_InitExcision EinsteinInitialData/IDAnalyticBH EinsteinInitialData/IDAxiBrillBH EinsteinInitialData/IDAxiOddBrillBH EinsteinInitialData/IDBrillData EinsteinInitialData/IDConstraintViolate EinsteinInitialData/IDFileADM EinsteinInitialData/IDLinearWaves CactusWave/IDScalarWave CactusWave/IDScalarWaveC CactusWave/IDScalarWaveCXX CactusWave/IDScalarWaveElliptic CactusExamples/IDWaveMoL WVUThorns/ID_converter_ILGRMHD CactusBase/IOASCII CactusBase/IOBasic CactusPUGHIO/IOHDF5 CactusPUGHIO/IOHDF5Util CactusIO/IOJpeg CactusBase/IOUtil WVUThorns/IllinoisGRMHD CactusBase/InitBase CactusNumerical/InterpToArray EinsteinExact/KerrSchild ExternalLibraries/LORENE CactusNumerical/LocalInterp CactusNumerical/LocalInterp2 CactusNumerical/LocalReduce Carpet/LoopControl McLachlan/ML_ADMConstraints McLachlan/ML_ADMQuantities McLachlan/ML_BSSN McLachlan/ML_BSSN_Helper McLachlan/ML_BSSN_Test McLachlan/ML_CCZ4 McLachlan/ML_CCZ4_Helper McLachlan/ML_CCZ4_Test McLachlan/ML_WaveToy McLachlan/ML_WaveToy_Test ExternalLibraries/MPI CactusUtils/MemSpeed EinsteinInitialData/Meudon_Bin_BH EinsteinInitialData/Meudon_Bin_NS EinsteinInitialData/Meudon_Mag_NS EinsteinExact/Minkowski CactusNumerical/MoL EinsteinExact/ModifiedSchwarzschildBL EinsteinAnalysis/Multipole CactusUtils/NaNCatcher CactusUtils/NaNChecker EinsteinEvolve/NewRad CactusUtils/Nice EinsteinInitialData/NoExcision CactusUtils/NoMPI CactusNumerical/Noise CactusNumerical/Norms PITTNullCode/NullConstr PITTNullCode/NullDecomp PITTNullCode/NullEvolve PITTNullCode/NullExact PITTNullCode/NullGrid PITTNullCode/NullInterp PITTNullCode/NullNews PITTNullCode/NullPsiInt PITTNullCode/NullSHRExtract PITTNullCode/NullVars ExternalLibraries/OpenBLAS ExternalLibraries/OpenSSL EinsteinAnalysis/Outflow ExternalLibraries/PAPI CactusPUGH/PUGH CactusPUGH/PUGHInterp CactusPUGH/PUGHReduce CactusPUGH/PUGHSlab CactusNumerical/Periodic Carpet/PeriodicCarpet CactusExamples/Poisson EinsteinAnalysis/PunctureTracker EinsteinAnalysis/QuasiLocalMeasures Carpet/ReductionTest Carpet/ReductionTest2 Carpet/ReductionTest3 CactusNumerical/ReflectionSymmetry Carpet/RegridSyncTest EinsteinInitialData/RotatingDBHIVP CactusNumerical/RotatingSymmetry180 CactusNumerical/RotatingSymmetry90 CactusExamples/SampleBoundary CactusExamples/SampleIO WVUThorns/Seed_Magnetic_Fields EinsteinUtils/SetMask_SphericalSurface EinsteinExact/ShiftedGaugeWave CactusNumerical/Slab CactusNumerical/SlabTest CactusConnect/Socket CactusNumerical/SpaceMask PITTNullCode/SphericalHarmonicDecomp PITTNullCode/SphericalHarmonicRecon PITTNullCode/SphericalHarmonicReconGen CactusNumerical/SphericalSurface EinsteinBase/StaticConformal CactusNumerical/SummationByParts CactusBase/SymBase CactusUtils/SystemStatistics CactusUtils/SystemTopology CactusElliptic/TATelliptic EinsteinUtils/TGRtensor EinsteinInitialData/TOVSolver CactusUtils/TerminationTrigger CactusTest/TestArrays Carpet/TestCarpetGridInfo CactusTest/TestComplex CactusTest/TestCoordinates CactusTest/TestFortranCrayPointers CactusTest/TestFortranDependencies1 CactusTest/TestFortranDependencies2 CactusTest/TestFpointerNULL CactusTest/TestFreeF90 CactusTest/TestGlobalReduce CactusTest/TestInclude1 CactusTest/TestInclude2 CactusNumerical/TestLocalInterp2 CactusNumerical/TestLocalReduce CactusTest/TestLoop Carpet/TestLoopControl CactusTest/TestMath CactusTest/TestMoL CactusTest/TestPar CactusTest/TestReduce CactusTest/TestSchedule CactusTest/TestStrings CactusTest/TestTable CactusTest/TestTimers CactusTest/TestTypes CactusBase/Time CactusExamples/TimerInfo CactusUtils/TimerReport Carpet/Timers EinsteinBase/TmunuBase CactusUtils/Trigger EinsteinInitialData/TwoPunctures EinsteinExact/Vaidya2 CactusUtils/Vectors CactusWave/WaveBinarySource CactusExamples/WaveMoL CactusExamples/WaveToy1DF77 CactusExamples/WaveToy2DF77 CactusWave/WaveToyC CactusWave/WaveToyCXX CactusWave/WaveToyExtra CactusWave/WaveToyF77 CactusWave/WaveToyF90 CactusWave/WaveToyFreeF90 EinsteinAnalysis/WeylScal4 ExternalLibraries/hwloc ExternalLibraries/libjpeg ExternalLibraries/pciutils ExternalLibraries/pthreads ExternalLibraries/zlib }}} -- Ticket URL: <https://trac.einsteintoolkit.org/ticket/1830> Einstein Toolkit <http://einsteintoolkit.org> The Einstein Toolkit

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